How to Perform a Chi-Square Test of Independence in R (With Examples)

A Chi-Square Test of Independence is a statistical test used to determine if there is a significant association between two categorical variables. In R, the chi-square test can be performed using the chisq.test() function, which takes two variables as arguments and returns the chi-square statistic, the p-value, the degrees of freedom, and the expected frequencies. To illustrate the use of the chisq.test() function, we can consider a hypothetical example where we want to determine if there is a relationship between gender and the type of pet a person has.


A Chi-Square Test of Independence is used to determine whether or not there is a significant association between two .

This tutorial explains how to perform a Chi-Square Test of Independence in R.

Example: Chi-Square Test of Independence in R

Suppose we want to know whether or not gender is associated with political party preference. We take a simple random sample of 500 voters and survey them on their political party preference. The following table shows the results of the survey:

  Republican Democrat Independent Total
Male 120 90 40 250
Female 110 95 45 250
Total 230 185 85 500

Use the following steps to perform a Chi-Square Test of Independence in R to determine if gender is associated with political party preference.

Step 1: Create the data.

First, we will create a table to hold our data:

#create table
data <- matrix(c(120, 90, 40, 110, 95, 45), ncol=3, byrow=TRUE)
colnames(data) <- c("Rep","Dem","Ind")
rownames(data) <- c("Male","Female")
data <- as.table(data)

#view table
data

       Rep Dem Ind
Male   120  90  40
Female 110  95  45

Step 2: Perform the Chi-Square Test of Independence.

Next, we can perform the Chi-Square Test of Independence using the chisq.test() function:

#Perform Chi-Square Test of Independence
chisq.test(data)

	Pearson's Chi-squared test

data:  data
X-squared = 0.86404, df = 2, p-value = 0.6492

The way to interpret the output is as follows:

  • Chi-Square Test Statistic: 0.86404
  • Degrees of freedom: (calculated as #rows-1 * #columns-1)
  • p-value: 0.6492

Recall that the Chi-Square Test of Independence uses the following null and alternative hypotheses:

  • H0: (null hypothesis) The two variables are independent.
  • H1: (alternative hypothesis) The two variables are not independent.

Since the p-value (0.6492) of the test is not less than 0.05, we fail to reject the null hypothesis. This means we do not have sufficient evidence to say that there is an association between gender and political party preference.

An Introduction to the Chi-Square Test of Independence
Chi-Square Test of Independence Calculator
How to Calculate the P-Value of a Chi-Square Statistic in R
How to Find the Chi-Square Critical Value in R

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